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Region 4

Slice 01

Segmentation overlay

Segmentation overlay

Summary

Exclusions by category

Flagged axons (visual review)

Flagged axons

Exclusion details

Axon IDCategoryG-ratioAxon diam (um)Myelin thickness (um)SolidityReasonsCloseup
0border0.8704.02610.29980.839border-touchingview
1invalid2.3552.7111-0.77990.701gratio=2.355; no myelin; low solidity (0.701)view
2invalid1.0000.01030.00001.000gratio=1.000; no myelin; tiny axon (0.0103 um)view
3invalid1.0000.01460.00001.000gratio=1.000; no myelin; tiny axon (0.0146 um)view
4invalid1.0000.02060.00001.000gratio=1.000; no myelin; tiny axon (0.0206 um)view
5invalid1.0000.01030.00001.000gratio=1.000; no myelin; tiny axon (0.0103 um)view
6border0.6682.15250.53440.635border-touching; low solidity (0.635)view
7invalid1.0000.01460.00001.000gratio=1.000; no myelin; tiny axon (0.0146 um)view
8artifact0.0150.01460.49211.000tiny axon (0.0146 um); very low gratio (0.015); myelin>>axon (mt/ad=33.72)view
10artifact0.0110.01030.44911.000tiny axon (0.0103 um); very low gratio (0.011); myelin>>axon (mt/ad=43.52)view
11artifact0.0110.01030.46171.000tiny axon (0.0103 um); very low gratio (0.011); myelin>>axon (mt/ad=44.74)view
12artifact0.0070.01461.00181.000tiny axon (0.0146 um); very low gratio (0.007); myelin>>axon (mt/ad=68.65)view
13artifact0.0890.01030.05251.000tiny axon (0.0103 um); very low gratio (0.089); myelin>>axon (mt/ad=5.09)view
14artifact0.0790.01460.08511.000tiny axon (0.0146 um); very low gratio (0.079); myelin>>axon (mt/ad=5.83)view
15invalid1.0000.02920.00001.000gratio=1.000; no myelin; tiny axon (0.0292 um)view
17border0.4380.33720.21640.927border-touchingview
18artifact0.0770.01030.06191.000tiny axon (0.0103 um); very low gratio (0.077); myelin>>axon (mt/ad=6.00)view
19artifact0.0990.01460.06641.000tiny axon (0.0146 um); very low gratio (0.099); myelin>>axon (mt/ad=4.55)view
22merge_error0.8631.58780.12610.718low solidity (0.718)view
23artifact0.1400.02060.06351.000tiny axon (0.0206 um); very low gratio (0.140); myelin>>axon (mt/ad=3.08)view
26invalid1.0000.01460.00001.000gratio=1.000; no myelin; tiny axon (0.0146 um)view
27border0.8511.35770.11890.932border-touchingview
28artifact0.0990.02060.09381.000tiny axon (0.0206 um); very low gratio (0.099); myelin>>axon (mt/ad=4.54)view
30artifact0.1960.01460.02991.000tiny axon (0.0146 um); very low gratio (0.196); myelin>>axon (mt/ad=2.05)view
32artifact0.0540.01030.09111.000tiny axon (0.0103 um); very low gratio (0.054); myelin>>axon (mt/ad=8.83)view
33artifact0.1180.02920.10910.889tiny axon (0.0292 um); very low gratio (0.118); myelin>>axon (mt/ad=3.74)view
35artifact0.1790.04130.09441.000tiny axon (0.0413 um); very low gratio (0.179); myelin>>axon (mt/ad=2.29)view
37artifact0.0740.01460.09181.000tiny axon (0.0146 um); very low gratio (0.074); myelin>>axon (mt/ad=6.29)view
38artifact0.3350.04000.03970.714tiny axon (0.0400 um); low solidity (0.714)view
39artifact0.1450.01460.04301.000tiny axon (0.0146 um); very low gratio (0.145); myelin>>axon (mt/ad=2.95)view
41artifact0.0910.01790.08881.000tiny axon (0.0179 um); very low gratio (0.091); myelin>>axon (mt/ad=4.97)view
42border0.8120.83850.09680.971border-touchingview
44artifact0.2010.02060.04101.000tiny axon (0.0206 um); very low gratio (0.201); myelin>>axon (mt/ad=1.99)view
45artifact0.1870.01790.03890.750tiny axon (0.0179 um); very low gratio (0.187); myelin>>axon (mt/ad=2.18)view
47artifact0.1200.01030.03771.000tiny axon (0.0103 um); very low gratio (0.120); myelin>>axon (mt/ad=3.65)view
49artifact0.2960.02920.03461.000tiny axon (0.0292 um); very low gratio (0.296); myelin>>axon (mt/ad=1.19)view
50invalid1.3151.7858-0.21370.642gratio=1.315; no myelin; low solidity (0.642)view
52border0.7080.74430.15330.798border-touchingview
53border0.8562.40080.20250.893border-touchingview
55artifact0.4240.03860.02630.700tiny axon (0.0386 um); low solidity (0.700)view
59border0.5800.22320.08090.818border-touchingview
60artifact0.5190.04730.02190.656tiny axon (0.0473 um); low solidity (0.656)view
61invalid1.0000.04500.00000.679gratio=1.000; no myelin; tiny axon (0.0450 um); low solidity (0.679)view
62artifact0.2770.01460.01901.000tiny axon (0.0146 um); very low gratio (0.277); myelin>>axon (mt/ad=1.30)view
63artifact0.5550.03570.01430.800tiny axon (0.0357 um)view
65artifact0.4630.03570.02070.600tiny axon (0.0357 um); low solidity (0.600)view
66artifact0.2480.02060.03131.000tiny axon (0.0206 um); very low gratio (0.248); myelin>>axon (mt/ad=1.52)view
68border0.7761.27990.18480.828border-touchingview
69merge_errornan2.2443nan0.656low solidity (0.656)view
70artifact0.0260.02920.55080.800tiny axon (0.0292 um); very low gratio (0.026); myelin>>axon (mt/ad=18.87)view
71myelin_dominant0.2450.07720.11920.691very low gratio (0.245); low solidity (0.691); myelin>>axon (mt/ad=1.54)view
79merge_error0.6790.88520.20920.738low solidity (0.738)view
83invalid1.0750.8556-0.02980.736gratio=1.075; no myelin; low solidity (0.736)view
84merge_error0.7771.12250.16100.708low solidity (0.708)view
85merge_error0.6651.89220.47730.674low solidity (0.674)view
86artifact0.1240.01460.05151.000tiny axon (0.0146 um); very low gratio (0.124); myelin>>axon (mt/ad=3.53)view
87merge_error0.3650.34840.30270.682low solidity (0.682)view
88artifact0.2200.02060.03671.000tiny axon (0.0206 um); very low gratio (0.220); myelin>>axon (mt/ad=1.78)view
90merge_error0.6511.19430.32050.518low solidity (0.518)view
94artifact0.1370.02060.06501.000tiny axon (0.0206 um); very low gratio (0.137); myelin>>axon (mt/ad=3.15)view
95artifact0.1080.02060.08491.000tiny axon (0.0206 um); very low gratio (0.108); myelin>>axon (mt/ad=4.12)view
97artifact0.2060.02920.05630.800tiny axon (0.0292 um); very low gratio (0.206); myelin>>axon (mt/ad=1.93)view
100artifact0.0700.01460.09721.000tiny axon (0.0146 um); very low gratio (0.070); myelin>>axon (mt/ad=6.66)view
101artifact0.0790.01790.10461.000tiny axon (0.0179 um); very low gratio (0.079); myelin>>axon (mt/ad=5.85)view
110border0.7330.86100.15660.899border-touchingview
111merge_error0.7693.07000.46030.540low solidity (0.540)view
113border0.8300.75230.07700.964border-touchingview
115merge_error0.7251.11220.21050.586low solidity (0.586)view
117border0.8532.88730.24780.632border-touching; low solidity (0.632)view
119merge_error0.4910.52810.27340.744low solidity (0.744)view
120merge_error0.6430.95640.26600.744low solidity (0.744)view
122merge_error0.7151.23900.24750.672low solidity (0.672)view
123myelin_dominant0.2510.05460.08130.651very low gratio (0.251); low solidity (0.651); myelin>>axon (mt/ad=1.49)view
124myelin_dominant0.2120.07150.13320.873very low gratio (0.212); myelin>>axon (mt/ad=1.86)view
125border0.8851.80790.11710.892border-touchingview
126artifact0.4530.02920.01761.000tiny axon (0.0292 um)view
130invalid1.3391.8174-0.23020.716gratio=1.339; no myelin; low solidity (0.716)view
131artifact0.3560.04130.03731.000tiny axon (0.0413 um)view
132artifact0.3330.01460.01461.000tiny axon (0.0146 um)view
133myelin_dominant0.2500.10920.16400.593very low gratio (0.250); low solidity (0.593); myelin>>axon (mt/ad=1.50)view
135invalid1.0000.01030.00001.000gratio=1.000; no myelin; tiny axon (0.0103 um)view
136invalid1.0000.01460.00001.000gratio=1.000; no myelin; tiny axon (0.0146 um)view
143invalid1.0000.01030.00001.000gratio=1.000; no myelin; tiny axon (0.0103 um)view

Slice 05

Segmentation overlay

Segmentation overlay

Summary

Exclusions by category

Flagged axons (visual review)

Flagged axons

Exclusion details

Axon IDCategoryG-ratioAxon diam (um)Myelin thickness (um)SolidityReasonsCloseup
0border0.8140.46280.05290.975border-touchingview
6artifact0.3270.03860.03970.667tiny axon (0.0386 um); low solidity (0.667); myelin>>axon (mt/ad=1.03)view
7artifact0.1040.02310.09950.833tiny axon (0.0231 um); very low gratio (0.104); myelin>>axon (mt/ad=4.31)view
8artifact0.3850.02060.01650.800tiny axon (0.0206 um)view
9invalid1.0000.01460.00001.000gratio=1.000; no myelin; tiny axon (0.0146 um)view
10invalid1.0000.01030.00001.000gratio=1.000; no myelin; tiny axon (0.0103 um)view
11invalid1.0000.01030.00001.000gratio=1.000; no myelin; tiny axon (0.0103 um)view
13artifact0.8160.02060.00231.000tiny axon (0.0206 um)view
15artifact0.0730.02060.13071.000tiny axon (0.0206 um); very low gratio (0.073); myelin>>axon (mt/ad=6.33)view
17border0.8921.05770.06390.948border-touchingview
20border0.7590.55680.08840.960border-touchingview
21myelin_dominant0.2110.05050.09440.750very low gratio (0.211); myelin>>axon (mt/ad=1.87)view
23artifact0.0650.01460.10511.000tiny axon (0.0146 um); very low gratio (0.065); myelin>>axon (mt/ad=7.21)view
24artifact0.0600.01460.11471.000tiny axon (0.0146 um); very low gratio (0.060); myelin>>axon (mt/ad=7.86)view
28border0.2630.03570.05001.000border-touching; tiny axon (0.0357 um); very low gratio (0.263); myelin>>axon (mt/ad=1.40)view
29invalid1.0000.08940.00000.987gratio=1.000; no myelinview
30invalid1.0000.04130.00000.800gratio=1.000; no myelin; tiny axon (0.0413 um)view
31invalid1.0000.03570.00001.000gratio=1.000; no myelin; tiny axon (0.0357 um)view
34invalid1.0000.01460.00001.000gratio=1.000; no myelin; tiny axon (0.0146 um)view
35invalid1.0000.01460.00001.000gratio=1.000; no myelin; tiny axon (0.0146 um)view
36invalid1.0000.02920.00001.000gratio=1.000; no myelin; tiny axon (0.0292 um)view
38invalid1.0000.01460.00001.000gratio=1.000; no myelin; tiny axon (0.0146 um)view
39invalid1.0000.03100.00001.000gratio=1.000; no myelin; tiny axon (0.0310 um)view
43invalid1.0000.06840.00000.688gratio=1.000; no myelin; low solidity (0.688)view
44artifact0.0500.01460.13941.000tiny axon (0.0146 um); very low gratio (0.050); myelin>>axon (mt/ad=9.56)view
45invalid1.0000.02920.00001.000gratio=1.000; no myelin; tiny axon (0.0292 um)view
53border0.7791.82280.25790.952border-touchingview
56artifact0.0970.01460.06781.000tiny axon (0.0146 um); very low gratio (0.097); myelin>>axon (mt/ad=4.65)view
59artifact0.5000.02060.01031.000tiny axon (0.0206 um)view
62artifact0.0670.01030.07171.000tiny axon (0.0103 um); very low gratio (0.067); myelin>>axon (mt/ad=6.95)view
63artifact0.0660.02060.14600.800tiny axon (0.0206 um); very low gratio (0.066); myelin>>axon (mt/ad=7.07)view
69invalid1.0000.01460.00001.000gratio=1.000; no myelin; tiny axon (0.0146 um)view
71artifact0.5350.02060.00901.000tiny axon (0.0206 um)view
72artifact0.3330.03720.03720.812tiny axon (0.0372 um); myelin>>axon (mt/ad=1.00)view
73artifact0.0540.03260.28600.909tiny axon (0.0326 um); very low gratio (0.054); myelin>>axon (mt/ad=8.77)view
81artifact0.5440.03720.01560.812tiny axon (0.0372 um)view
82artifact0.2290.01030.01731.000tiny axon (0.0103 um); very low gratio (0.229); myelin>>axon (mt/ad=1.68)view
83invalid1.0000.02730.00001.000gratio=1.000; no myelin; tiny axon (0.0273 um)view
85invalid1.0000.03260.00001.000gratio=1.000; no myelin; tiny axon (0.0326 um)view
91border0.7330.29900.05450.938border-touchingview
94merge_error0.7960.96640.12360.731low solidity (0.731)view
97invalid1.0000.01460.00001.000gratio=1.000; no myelin; tiny axon (0.0146 um)view
98merge_error0.4330.08250.05410.653low solidity (0.653)view
102border0.8481.46310.13070.958border-touchingview
106invalid1.0000.02060.00001.000gratio=1.000; no myelin; tiny axon (0.0206 um)view
107border0.8531.07640.09290.978border-touchingview
108artifact0.5770.02920.01071.000tiny axon (0.0292 um)view
109artifact0.2120.02060.03841.000tiny axon (0.0206 um); very low gratio (0.212); myelin>>axon (mt/ad=1.86)view
111artifact0.1770.01460.03401.000tiny axon (0.0146 um); very low gratio (0.177); myelin>>axon (mt/ad=2.33)view
114artifact0.2050.02920.05651.000tiny axon (0.0292 um); very low gratio (0.205); myelin>>axon (mt/ad=1.94)view
118invalid1.0000.01460.00001.000gratio=1.000; no myelin; tiny axon (0.0146 um)view
119artifact0.0280.01030.17721.000tiny axon (0.0103 um); very low gratio (0.028); myelin>>axon (mt/ad=17.17)view
123merge_error0.6580.08060.02100.693low solidity (0.693)view
133border0.8461.01170.09180.955border-touchingview
137border0.4480.12380.07640.954border-touchingview
151invalid1.0000.05460.00000.875gratio=1.000; no myelinview
152invalid1.0000.02060.00001.000gratio=1.000; no myelin; tiny axon (0.0206 um)view
153invalid1.0000.02060.00001.000gratio=1.000; no myelin; tiny axon (0.0206 um)view
159artifactnan0.0292nan0.800tiny axon (0.0292 um)view
160invalid1.0000.02060.00001.000gratio=1.000; no myelin; tiny axon (0.0206 um)view
161artifact0.4080.02060.01501.000tiny axon (0.0206 um)view
162artifact0.3730.03260.02750.833tiny axon (0.0326 um)view
166artifact0.4140.02530.01791.000tiny axon (0.0253 um)view
169border0.7771.30900.18820.953border-touchingview
172border0.9021.60780.08750.973border-touchingview
173border0.9071.57980.08050.939border-touchingview
174border0.7941.19150.15470.946border-touchingview
175artifact0.1680.02310.05731.000tiny axon (0.0231 um); very low gratio (0.168); myelin>>axon (mt/ad=2.48)view
176border0.8461.75800.16030.960border-touchingview
177border0.8461.29460.11810.965border-touchingview
178border0.6060.35800.11630.953border-touchingview
179border0.7490.49830.08340.972border-touchingview

Slice 07

Segmentation overlay

Segmentation overlay

Summary

Exclusions by category

Flagged axons (visual review)

Flagged axons

Exclusion details

Axon IDCategoryG-ratioAxon diam (um)Myelin thickness (um)SolidityReasonsCloseup
0border0.7550.65620.10650.857border-touchingview
1border0.8411.01560.09610.965border-touchingview
2border0.9051.18710.06240.919border-touchingview
3border0.8530.46740.04020.932border-touchingview
4border0.8781.28120.08890.936border-touchingview
5border0.7990.71570.09010.936border-touchingview
6border0.7480.23530.03960.868border-touchingview
7border0.7720.50880.07520.977border-touchingview
8border0.7860.79920.10870.963border-touchingview
9border0.7401.66870.29380.938border-touchingview
10border0.8310.38380.03910.930border-touchingview
11border0.7460.48040.08170.965border-touchingview
12invalid1.0000.02920.00001.000gratio=1.000; no myelin; tiny axon (0.0292 um)view
13artifact0.3430.02060.01981.000tiny axon (0.0206 um)view
14border0.9081.01010.05140.977border-touchingview
15artifact0.3330.02060.02061.000tiny axon (0.0206 um); myelin>>axon (mt/ad=1.00)view
16border0.7290.71040.13220.952border-touchingview
17artifact0.3780.03570.02940.800tiny axon (0.0357 um)view
18invalid1.0000.02920.00001.000gratio=1.000; no myelin; tiny axon (0.0292 um)view
24border0.8362.13080.20910.947border-touchingview
29invalid1.0000.04130.00000.800gratio=1.000; no myelin; tiny axon (0.0413 um)view
36artifact0.1670.01460.03651.000tiny axon (0.0146 um); very low gratio (0.167); myelin>>axon (mt/ad=2.50)view
37myelin_dominant0.2670.18490.25390.710very low gratio (0.267); low solidity (0.710); myelin>>axon (mt/ad=1.37)view
44artifact0.1580.02060.05491.000tiny axon (0.0206 um); very low gratio (0.158); myelin>>axon (mt/ad=2.66)view
45invalid1.0000.01460.00001.000gratio=1.000; no myelin; tiny axon (0.0146 um)view
46border0.5700.19790.07480.929border-touchingview
56artifact0.4780.04500.02450.905tiny axon (0.0450 um)view
60myelin_dominant0.2440.05840.09040.914very low gratio (0.244); myelin>>axon (mt/ad=1.55)view
61border0.9211.41060.06050.912border-touchingview
63artifact0.3540.02060.01891.000tiny axon (0.0206 um)view
64artifact0.4080.02060.01501.000tiny axon (0.0206 um)view
67border0.7470.39850.06760.927border-touchingview
71myelin_dominant0.2770.07150.09330.889very low gratio (0.277); myelin>>axon (mt/ad=1.31)view
72invalid1.0000.02310.00000.833gratio=1.000; no myelin; tiny axon (0.0231 um)view
74border0.8501.11300.09810.967border-touchingview
75invalid1.0000.04380.00000.783gratio=1.000; no myelin; tiny axon (0.0438 um)view
86border0.7961.02390.13090.892border-touchingview
93invalid1.0000.04130.00000.800gratio=1.000; no myelin; tiny axon (0.0413 um)view
94invalid1.0000.09790.00000.909gratio=1.000; no myelinview
98artifact0.3670.03860.03330.824tiny axon (0.0386 um)view
99border0.8914.64070.28310.961border-touchingview
102artifact0.0890.01030.05301.000tiny axon (0.0103 um); very low gratio (0.089); myelin>>axon (mt/ad=5.13)view
104artifact0.1470.01460.04251.000tiny axon (0.0146 um); very low gratio (0.147); myelin>>axon (mt/ad=2.91)view
110artifact0.2200.02920.05190.889tiny axon (0.0292 um); very low gratio (0.220); myelin>>axon (mt/ad=1.78)view
112artifact0.3750.02920.02440.889tiny axon (0.0292 um)view
113artifact0.2980.03720.04370.765tiny axon (0.0372 um); very low gratio (0.298); myelin>>axon (mt/ad=1.18)view
117artifact0.7560.02060.00331.000tiny axon (0.0206 um)view
120artifact0.0700.01460.09681.000tiny axon (0.0146 um); very low gratio (0.070); myelin>>axon (mt/ad=6.63)view
121artifact0.1500.01460.04141.000tiny axon (0.0146 um); very low gratio (0.150); myelin>>axon (mt/ad=2.84)view
123artifact0.4570.03860.02291.000tiny axon (0.0386 um)view
126merge_error0.5220.25900.11860.647low solidity (0.647)view
127artifact0.1200.01030.03771.000tiny axon (0.0103 um); very low gratio (0.120); myelin>>axon (mt/ad=3.65)view
128artifact0.3160.01790.01931.000tiny axon (0.0179 um); myelin>>axon (mt/ad=1.08)view
132artifact0.2350.04610.07490.952tiny axon (0.0461 um); very low gratio (0.235); myelin>>axon (mt/ad=1.62)view
135artifact0.4710.02920.01641.000tiny axon (0.0292 um)view
136myelin_dominant0.1950.13050.26880.762very low gratio (0.195); myelin>>axon (mt/ad=2.06)view
140artifact0.0670.02310.16110.833tiny axon (0.0231 um); very low gratio (0.067); myelin>>axon (mt/ad=6.98)view
142invalid1.0000.01460.00001.000gratio=1.000; no myelin; tiny axon (0.0146 um)view
150merge_error0.6930.07150.01580.738low solidity (0.738)view
152invalid1.0000.06840.00000.815gratio=1.000; no myelinview
154invalid1.0000.03860.00000.933gratio=1.000; no myelin; tiny axon (0.0386 um)view
156border0.7980.84050.10610.930border-touchingview
162invalid1.0000.01030.00001.000gratio=1.000; no myelin; tiny axon (0.0103 um)view
164invalid1.0000.02060.00001.000gratio=1.000; no myelin; tiny axon (0.0206 um)view
167invalid1.0000.01030.00001.000gratio=1.000; no myelin; tiny axon (0.0103 um)view
175border0.8260.96770.10190.937border-touchingview
177invalid1.0000.01460.00001.000gratio=1.000; no myelin; tiny axon (0.0146 um)view
182artifact0.2360.02060.03351.000tiny axon (0.0206 um); very low gratio (0.236); myelin>>axon (mt/ad=1.62)view
183border0.7200.45540.08870.960border-touchingview
188border0.8733.26810.23740.943border-touchingview
190merge_errornan0.0876nan0.581low solidity (0.581)view
191border0.9011.76240.09640.957border-touchingview
194border0.8651.29230.10060.954border-touchingview
195border0.7971.06130.13530.969border-touchingview
196border0.7710.41990.06240.962border-touchingview
197border0.6550.29620.07800.886border-touchingview
198border0.4690.19790.11210.904border-touchingview
199border0.7410.05460.00951.000border-touchingview